This tutorial introduce Qploidy package features. The first version of the package provides a standardization method for read counts (or intensities if genotyping platform is...
This tutorial will show how to build a linkage map for inbred lines populations using the most updated methods implemented in OneMap 3.0.
Here we use Docker/singularity containers to perform SNP calling with GATK. We also show how to run a Workflow Description Language (WDL) to perform the...
Here we use Docker containers to perform SNP calling with GATK.Before start, it is important to highlight that all software here presented has several parameters...